Biocatalysis
An Industrial Perspective
www.pdfgrip.com
Catalysis Series
Editor-in-chief:
Chris Hardacre, University of Manchester, UK
Series editors:
Bert Klein Gebbink, Utrecht University, The Netherlands
Jose Rodriguez, Brookhaven National Laboratory, USA
Titles in the series:
1: Carbons and Carbon Supported Catalysts in Hydroprocessing
2: Chiral Sulfur Ligands: Asymmetric Catalysis
3: Recent Developments in Asymmetric Organocatalysis
4: Catalysis in the Refining of Fischer–Tropsch Syncrude
5: Organocatalytic Enantioselective Conjugate Addition Reactions: A
Powerful Tool for the Stereocontrolled Synthesis of Complex Molecules
6: N-Heterocyclic Carbenes: From Laboratory Curiosities to Efficient
Synthetic Tools
7: P-Stereogenic Ligands in Enantioselective Catalysis
8: Chemistry of the Morita–Baylis–Hillman Reaction
9: Proton-Coupled Electron Transfer: A Carrefour of Chemical Reactivity
Traditions
10: Asymmetric Domino Reactions
11: C–H and C–X Bond Functionalization: Transition Metal Mediation
12: Metal Organic Frameworks as Heterogeneous Catalysts
13: Environmental Catalysis Over Gold-Based Materials
14: Computational Catalysis
15: Catalysis in Ionic Liquids: From Catalyst Synthesis to Application
16: Economic Synthesis of Heterocycles: Zinc, Iron, Copper, Cobalt,
Manganese and Nickel Catalysts
17: Metal Nanoparticles for Catalysis: Advances and Applications
18: Heterogeneous Gold Catalysts and Catalysis
19: Conjugated Linoleic Acids and Conjugated Vegetable Oils
20: Enantioselective Multicatalysed Tandem Reactions
21: New Trends in Cross-Coupling: Theory and Applications
22: Atomically-Precise Methods for Synthesis of Solid Catalysts
23: Nanostructured Carbon Materials for Catalysis
24: Heterocycles from Double-Functionalized Arenes: Transition Metal
Catalyzed Coupling Reactions
www.pdfgrip.com
25: Asymmetric Functionalization of C–H Bonds
26: Enantioselective Nickel-catalysed Transformations
27: N-Heterocyclic Carbenes: From Laboratory Curiosities to Efficient
Synthetic Tools, 2nd edition
28: Zeolites in Catalysis: Properties and Applications
29: Biocatalysis: An Industrial Perspective
How to obtain future titles on publication:
A standing order plan is available for this series. A standing order will bring
delivery of each new volume immediately on publication.
For further information please contact:
Book Sales Department, Royal Society of Chemistry, Thomas Graham House,
Science Park, Milton Road, Cambridge, CB4 0WF, UK
Telephone: +44 (0)1223 420066, Fax: +44 (0)1223 420247
Email:
Visit our website at www.rsc.org/books
www.pdfgrip.com
www.pdfgrip.com
Biocatalysis
An Industrial Perspective
Edited by
Gonzalo de Gonzalo
University of Seville, Spain
Email:
and
Pablo Domínguez de María
Sustainable Momentum, SL, Las Palmas de Gran Canaria, Spain
Email:
www.pdfgrip.com
Catalysis Series No. 29
Print ISBN: 978-1-78262-619-0
PDF ISBN: 978-1-78262-999-3
EPUB ISBN: 978-1-78801-246-1
ISSN: 1757-6725
A catalogue record for this book is available from the British Library
© The Royal Society of Chemistry 2018
All rights reserved
Apart from fair dealing for the purposes of research for non-commercial purposes or for
private study, criticism or review, as permitted under the Copyright, Designs and Patents
Act 1988 and the Copyright and Related Rights Regulations 2003, this publication may
not be reproduced, stored or transmitted, in any form or by any means, without the prior
permission in writing of The Royal Society of Chemistry or the copyright owner, or in
the case of reproduction in accordance with the terms of licences issued by the Copyright
Licensing Agency in the UK, or in accordance with the terms of the licences issued by the
appropriate Reproduction Rights Organization outside the UK. Enquiries concerning
reproduction outside the terms stated here should be sent to The Royal Society of
Chemistry at the address printed on this page.
Whilst this material has been produced with all due care, The Royal Society of Chemistry
cannot be held responsible or liable for its accuracy and completeness, nor for any
consequences arising from any errors or the use of the information contained in this
publication. The publication of advertisements does not constitute any endorsement by
The Royal Society of Chemistry or Authors of any products advertised. The views and
opinions advanced by contributors do not necessarily reflect those of The Royal Society of
Chemistry which shall not be liable for any resulting loss or damage arising as a result of
reliance upon this material.
The Royal Society of Chemistry is a charity, registered in England and Wales, Number
207890, and a company incorporated in England by Royal Charter (Registered No.
RC000524), registered office: Burlington House, Piccadilly, London W1J 0BA, UK,
Telephone: +44 (0) 207 4378 6556.
For further information see our web site at www.rsc.org
Printed in the United Kingdom by CPI Group (UK) Ltd, Croydon, CR0 4YY, UK
www.pdfgrip.com
Preface
Biocatalysis has acquired a relevant role in organic synthesis over recent
decades, stimulated by the outstanding developments in microbiology,
molecular biology, and bioinformatics, together with a mature know-how
in medium engineering and enzyme immobilization. Remarkable breakthroughs in those areas have enabled a wide accessibility to geneticallydesigned (tailored) biocatalysts as required at industrial scale, and in
many cases at acceptable prices. The accumulated knowledge has triggered
the implementation of enzyme catalysis in commercial processes – to
manufacture a broad product portfolio –, leading to highly selective reactor
set-ups, often conducted under mild conditions, and in many cases in an
environmentally-friendly manner.
The penetration of biocatalysis in industry is not, however, a straightforward task. Interdisciplinary teams need to act in a coordinated way, and
often under time-pressured deadlines. Remarkably, whilst there is ample
information available on how a biocatalytic process can (academically) be set
up, available knowledge emphasizing the link between laboratory research
and industrial processes is somewhat scarce. To enable a better transition
between these two worlds, the participation of industrialists in the academic
arena appears crucial to inspire an “industrial conceptual approach” to the
biocatalytic studies.
In this connection, this book has been conceived to contribute to bridging
the gap between academic studies on biocatalysis and industrial processes
related to free enzymes, cell free extracts or whole-cells systems. To provide
a comprehensive industrial vision, several companies of different sizes and
purposes have been invited to contribute with chapters on industrial biocatalysis. The fundamental question to be answered is “How do industries
think of, approach, and implement biocatalytic procedures?” Some contributions directly describe (their) industrial processes, giving hints on metrics,
Catalysis Series No. 29
Biocatalysis: An Industrial Perspective
Edited by Gonzalo de Gonzalo and Pablo Domínguez de María
© The Royal Society of Chemistry 2018
Published by the Royal Society of Chemistry, www.rsc.org
vii
www.pdfgrip.com
Preface
viii
productivities, and focus on the required parameters to deliver a practical
implementation. In contrast, other chapters focus on the challenges and
hurdles that are often encountered in the transit from laboratory-to-market.
All in all, we believe that this book gathers useful material that it is not
easily found in other literature sources, and that it is certainly very relevant
for the establishment of novel enzymatic processes. We think that the herein
reported “industrial thoughts” may trigger research groups (whether from
academia or companies) to further undertake action in biocatalysis.
We would like to warmly thank all the authors for their outstanding
contributions – realizing the difficulty that writing from industry may bring –
as well as to the entire Royal Society of Chemistry editorial team, for having
accompanied us in this challenging but highly rewarding adventure. We also
want to thank our families for their patience, commitment and generosity,
and for their constant support throughout the development of this book.
We sincerely hope that this book will be useful for your work in biocatalysis
and sustainable chemistry.
Gonzalo de Gonzalo, Pablo Domínguez de María
Seville and Las Palmas de Gran Canaria, Spain
www.pdfgrip.com
Contents
Part I: Context and Challenges for Industrial Biocatalysis
Chapter 1 An Appreciation of Biocatalysis in the Swiss Manufacturing
Environment
3
Rebecca Buller, Katrin Hecht, Marco Antonio Mirata and
Hans-Peter Meyer
1.1 Introduction
1.1.1 Biocatalysis in the Swiss Manufacturing
Environment
1.1.2 Current Status
1.1.3 Patent Analysis
1.2 Selected Enzyme Classes Used in the Swiss
Manufacturing Environment
1.2.1 Oxidoreductases EC1
1.2.2 Transferases EC2
1.3 Challenges
1.3.1 Regulation
1.3.2 Development Time
1.3.3 Technological Lock-in
1.3.4 Public Perception
1.3.5 Education
1.4 Opportunities
1.4.1 Starting Materials
1.4.2 Sustainability and Greenness
1.4.3 Swiss Industrial Biocatalysis Consortium
1.4.4 New Business Ideas
Catalysis Series No. 29
Biocatalysis: An Industrial Perspective
Edited by Gonzalo de Gonzalo and Pablo Domínguez de María
© The Royal Society of Chemistry 2018
Published by the Royal Society of Chemistry, www.rsc.org
ix
www.pdfgrip.com
3
7
7
14
16
17
22
25
25
30
32
32
33
35
35
36
36
37
Contents
x
1.5 Future Directions
cknowledgements
A
References
37
39
39
Chapter 2 Biocatalysis – A Greener Alternative in Synthetic Chemistry 44
Madhuresh Kumar Sethi, Purbita Chakraborty
and Rohit Shukla
2.1 Introduction
2.2 Motivation for Industry to Use/Research on
Biocatalysis
2.3 Challenges Faced by Biocatalysis in Industry
2.4 Prospects
2.5 Overview of Current Enzyme-based Processes
Implemented/In-progress at Industrial, Commercial
Scale
2.6 Our Experience in Some Chemoenzymatic Projects
2.6.1 Protease-mediated Synthesis of Valganciclovir
Intermediate
2.6.2 Chemoenzymatic Synthesis of Optically Pure
Rivastigmine Intermediate Using ADH from
Baker’s Yeast and KRED
2.6.3 Preparation of Deoxynojirimycin, Key
Intermediate of an Anti-diabetic Drug
2.7 Potential Safety Aspects
2.8 Conclusions
Abbreviations
Glossary
References
Chapter 3 Biocatalytic Synthesis of Small Molecules – Past, Present
and Future
Roland Wohlgemuth
3.1 Introduction
3.2 Biocatalytic Conversions of Racemates
3.2.1 Biocatalytic Resolution of Racemates
3.2.2 Biocatalytic Deracemizations
3.3 Biocatalytic Desymmetrizations
3.4 Biocatalytic Asymmetric Oxidations and Reductions
3.4.1 Biocatalytic Asymmetric Oxidations
3.4.2 Biocatalytic Asymmetric Reductions
3.5 Biocatalytic Asymmetric Hydrolysis and Acylation
Reactions
3.5.1 Biocatalytic Asymmetric Hydrolysis Reactions
3.5.2 Biocatalytic Asymmetric Acylation Reactions
www.pdfgrip.com
44
47
49
52
52
56
58
58
60
66
67
68
68
70
77
77
78
79
79
80
81
81
83
84
85
86
Contents
xi
3.6 Biocatalytic Asymmetric Transfer Reactions
3.7 Biocatalytic Asymmetric Addition and Elimination
Reactions
3.8 Summary and Outlook
References
Chapter 4 EntreChem: Building a Sustainable Business Case
in Biotechnology: From Biocatalysis to Synthetic
Biology
Javier González Sabín and Francisco Morís
4.1 Introduction
4.2 Biocatalysis
4.2.1 Enantiopure Chiral Building Blocks
4.2.2 Cascade Processes Taking Advantage of
Biocatalysis
4.3 Drug Development
4.3.1 Natural Products in Drug Discovery
4.3.2 EntreChem’s Approach to Natural Products
Drug Discovery
4.3.3 Aureolic Acids: The Quest for Clinically Viable
“Mithralogs”
4.3.4 Collismycin Analogs as Immunosuppressive
and Neuroprotective Drugs
4.3.5 Glycosylated Indolocarbazoles as Potent and
Selective Kinase Inhibitors
4.4 Business Models in Biocatalysis and Natural
Products Drug Discovery
References
86
88
89
90
98
98
99
99
100
105
105
107
109
112
115
117
121
Part II: Biocatalysis: from Pharmaceuticals to Bulk
Chemistry
Chapter 5 Bristol-Myers Squibb: Preparation of Chiral
Intermediates for the Development of Drugs and APIs
Ramesh N. Patel
5.1 Introduction
5.2 Anti-Alzheimer’s Drug. Enzymatic Preparation of
(R)-5,5,5-Trifluoronorvaline
5.3 Cholesterol Lowering Agents
5.3.1 Enantioselective Enzymatic Acylation of
Racemic Alcohol
5.3.2 Enzymatic Synthesis of (3S,5R)-Dihydroxy-6(benzyloxy)hexanoic Acid, Ethyl Ester
www.pdfgrip.com
127
127
128
130
130
131
Contents
xii
5.4 Calcitonin Gene-related Peptide Receptors
Antagonists (Migraine Treatment): Enzymatic
Preparation of (R)-2-Amino-3-(7-methyl-1H-indazol-
5-yl)propanoic Acid
5.5 Antidiabetic Drugs
5.5.1 Saxagliptin: Enzymatic Synthesis of (S)-N-
Boc-3-hydroxyadamantylglycine
5.5.2 Saxagliptin: Enzymatic Synthesis of N-Cbz-
4,5-dehydro-L-prolineamide and N-Boc-4,5-
dehydro-L-prolineamide
5.5.3 Saxagliptin: Enzymatic Ammonolysis of (5S)-
4,5-Dihydro-1H-pyrrole-1,5-dicarboxylic Acid,
1-(1,1-Dimethylethyl)-5-ethyl Ester
5.5.4 GLP-1 Receptor Agonists: Enzymatic
Preparation of (S)-Amino-3-[3-{6-
(2-methylphenyl)}pyridyl]-propionic Acid
5.6 Antihypertensive Drugs
5.6.1 Enzymatic Synthesis of (S)-6-
Hydroxynorleucine
5.6.2 Vanlev: Enzymatic Synthesis of Allysine
Ethylene Acetal
5.6.3 Vanlev: Enzymatic Synthesis of Thiazepine
5.6.4 Captopril: Enzymatic Preparation of (S)-3-
Benzoylthio-2-methylpropanoic Acid
5.7 Antiviral Drugs. Case Study: Atazanavir
5.7.1 Atazanavir: Enzymatic Synthesis of
(S)-Tertiary-leucine
5.7.2 Atazanavir: Enzymatic Preparation of (1S,2R)-
[3-Chloro-2-hydroxy-1-(phenylmethyl)propyl]
carbamic Acid, 1,1-Dimethyl-ethyl Ester
5.8 Antianxiety Drug. Buspirones: Enzymatic
Preparation of 6-Hydroxybuspirone
5.9 Antiviral Drugs. Hepatitis B Viral (HBV) Inhibitor:
Enzymatic Asymmetric Hydrolysis and Acetylation
5.10 Chemokine Receptor Modulators: Enzymatic
Desymmetrization of Dimethyl Ester
5.11 Anticancer Drugs
5.11.1 Paclitaxel Semisynthetic Process
5.11.2 Water-soluble Taxane Derivatives
5.11.3 Epothilones: Epothilone B and
Epothilone F
5.11.4 IGF-1 Receptor Inhibitor: Enzymatic
Preparation of (S)-2-Chloro-1-
(3-chlorophenyl)ethanol
5.11.5 Retinoic Acid Receptor Agonist:
Enzymatic Preparation of 2-(R)-Hydroxy-
2-(1′,2′,3′,4′-tetrahydro-1′,1′,4′,4′-
tetramethyl-6′-naphthalenyl)acetate
www.pdfgrip.com
132
134
134
136
137
138
140
140
141
142
143
144
144
146
147
149
150
151
151
154
155
157
158
Contents
xiii
5.12 Microbial Hydroxylation of Mutilin and
Pleuromutilin
5.13 Conclusions
Acknowledgements
References
Chapter 6 Johnson Matthey: A Technology Provider Perspective to
Biocatalysis in the Fine Chemicals Industry
Elina Siirola, Ahir Pushpanath, Desmond M. Schofield
and Paolo Braiuca
6.1 Introduction
6.2 Commercial Considerations
6.2.1 Technology Value
6.2.2 Manufacturing
6.2.3 Market Analysis
6.2.4 Catalyst Portfolio
6.3 Technical Considerations
6.3.1 Enzyme Recruitment
6.3.2 Enzyme Engineering
6.3.3 Process Improvement
6.4 Conclusions
Acknowledgements
References
Chapter 7 EnzymeWorks: Recent Advances in Enzyme
Engineering for Chemical Synthesis
Kui K. Chan, Ju Xin, Xiaoliang Liang, Lizeng Peng,
Bin Sun and Junhua Tao
7.1 Introduction to EnzymeWorks
7.1.1 Current Status of Biocatalyst Development
7.2 Biocatalysis in the Food and Beverage Industry
7.2.1 Introduction of Stevia Development
7.2.2 Plant Family 1 UDP-glycosyltransferase
Applications
7.2.3 Chemoenzymatic Synthesis of
Rebaudioside M
7.2.4 Enzyme Immobilization and Whole Cell
Biosynthesis Development
7.2.5 Future Perspectives on Biocatalysis in the
Food and Beverage Industry
7.3 Ketoreductase (KRED) Applications
7.3.1 Ibrutinib Development
7.3.2 Future Perspectives on Ketoreductase
(KRED) Biocatalysis
7.4 Biocatalysis in the Antibiotic Industry
7.4.1 Introduction to Cephalosporin C Acylase (CCA)
www.pdfgrip.com
158
160
161
161
168
168
170
170
172
172
173
174
175
179
182
186
188
188
190
190
191
192
193
194
199
201
202
202
205
208
208
210
Contents
xiv
7.4.2 Gene Expression, Structure and Catalytic
Mechanism of Acylases
7.4.3 Recent Advances in Cephalosporin C Acylase
(CCA) Development
7.4.4 Future Perspectives on Acylase Biocatalysis
7.4.5 Introduction to Deacetoxycephalosporin C
Synthase
7.4.6 Deacetoxycephalosporin C Synthase
Structure and Mechanism
7.4.7 Recent Advances in Deacetoxycephalosporin
C Synthase Development
7.4.8 Future Perspectives of Antibiotic
Biocatalysis
7.5 Future Perspectives of Biocatalyst Development
References
Chapter 8 Almac: An Industrial Perspective of Ene Reductase
(ERED) Biocatalysis
Gareth Brown, Thomas S. Moody, Megan Smyth and
Stephen J. C. Taylor
8.1 Introduction
8.1.1 Almac Group
8.1.2 Biocatalysis at Almac
8.1.3 The Rise of Biocatalysis
8.2 Introduction to Alkene Reduction
8.3 An Introduction to Ene Reductases and How
They Work
8.4 Examples of Ene Reductase Reactions Reported
in the Literature
8.4.1 Ene Reductases as Part of a Reaction
Sequence
8.4.2 Ene Reductases and Solvents
8.4.3 Challenges of Co-factor Recycle
8.4.4 Avoiding the Use of Nicotinamide
Co-factors
8.4.5 Impact of Synthetic Biology
8.4.6 Ene Reductases in Reverse: Oxidation
8.4.7 Thermophilic Ene-reductases
8.4.8 Alternative Screening Methods
8.5 Example of Utilisation of an ERED at Industrial
Scale
8.6 Transition of Ene Reductases to Mainstream
Biocatalytic Use
8.7 Conclusions
Acknowledgements
References
www.pdfgrip.com
212
216
217
217
219
220
222
222
223
229
229
229
230
230
231
232
233
234
239
240
241
245
247
248
248
249
251
252
253
253
Contents
xv
Chapter 9 GSK: Biocatalyst Discovery and Optimisation
Marcelo Kern, Gheorghe-Doru Roiban, Andrew Fosberry
and Radka Snajdrova
9.1 Introduction
9.2 Biocatalyst Discovery
9.2.1 Design of Enzyme Panels
9.2.2 Imine Reductase Panel – Importance and
Applicability
9.3 Biocatalyst Optimisation
9.3.1 Nelarabine Case Study
9.4 Conclusions
Acknowledgements
References
Chapter 10 PETROBRAS: Efforts on Biocatalysis for Fuels and
Chemicals Production
Aline Machado de Castro and José André Cavalcanti
da Silva
10.1 PETROBRAS Overview
10.2 Hydrolysis of Lignocellulosic and Starchy
Biomass
10.3 Synthesis of Solvents
10.3.1 Glycerol Carbonate
10.3.2 Butyl Acetate
10.4 Synthesis and Degradation of Polymers
10.4.1 Synthesis of Polyesters
10.4.2 Depolymerization of Poly(ethylene
terephthalate)
10.5 Synthesis of Biolubricants
10.6 Synthesis of Biodiesel
10.7 Concluding Remarks
References
257
257
260
260
260
268
269
272
273
273
276
276
277
280
280
281
282
282
284
285
289
292
292
Chapter 11 MetGen: Value from Wood – Enzymatic Solutions
Klara R. Birikh, Matti W. Heikkila, Alex Michine,
Antoine Mialon, Toni Grönroos, Petri Ihalainen, Antti
Varho, Veera Hämäläinen, Anu Suonpää and Sami-Pekka
Rantanen
298
298
11.1 Introduction
11.1.1 METGEN – Masters of Enzyme Technology
and Genetic Engineering
11.1.2 Biocatalysis of Wood – Motivation and
Challenges
11.2 Enzymes in Pulp and Paper
www.pdfgrip.com
298
300
301
Contents
xvi
11.2.1 Enzymes in Pulp & Paper Industry Sector –
Business Aspect
11.2.2 Major Enzyme Components for Wood
Applications
11.2.3 Enzyme Development – from Laboratory
to Industry
11.2.4 MetZyme® LIGNO™
11.2.5 MetZyme® BRILA™
11.2.6 Concluding Remarks on Enzymes in Pulp
and Paper
11.3 Biorefinery Enzymes
11.3.1 Renewable Chemical Industry Segment –
Business Aspect
11.3.2 Wood Biorefinery Concept
11.3.3 Biomass Hydrolysis – Chemicals and Enzymes
11.3.4 Biomass Is Not Oil; It Is More Like Soup
of the Day
11.3.5 Beyond Sugars
11.3.6 Biorefinery Enzymes – Concluding Remarks
11.3.7 Wood in Pulp and Paper and Biorefinery –
Common Problems or Window for
Opportunity?
Abbreviations
References
301
302
304
305
309
313
313
313
314
315
316
317
320
320
320
320
Part III: Biocatalyst Optimization with Industrial
Perspectives
Chapter 12 LentiKat’s: Industrial Biotechnology, Experiences
and Visions
Radek Stloukal, Jarmila Watzková and Kristýna Turková
12.1 Introduction
12.2 Lentikats Biotechnology
12.2.1 Potential of Lentikats Biotechnology
12.2.2 Properties of Lentikats Biotechnology
12.2.3 Production of Lentikats Biocatalyst
12.3 Experiences in Wastewater Treatment
12.3.1 Municipal Wastewater Treatment
12.3.2 Industrial Wastewater Treatment
12.3.3 Special Applications
12.3.4 Advantages of Lentikats Biotechnology in
Wastewater Treatment
www.pdfgrip.com
325
325
326
327
329
330
331
331
332
332
332
Contents
xvii
12.3.5 Product Lines
12.3.6 Wastewater Treatment Applications
12.4 Experiences in the Pharmaceutical & Food Industry
12.4.1 Food Technology Industry
12.4.2 Pharmaceutical Industry
12.4.3 Bio-based Chemicals Industry
12.4.4 Advantages of Lentikats Biotechnology in
the Pharmaceutical & Food Industry
12.4.5 Application Examples in the Pharmaceutical
& Food Industry
12.4.6 Pharmaceutical & Food Applications
12.5 Vision
References
Chapter 13 EziG: A Universal Platform for Enzyme Immobilisation
Karim Engelmark Cassimjee and Hans-Jürgen Federsel
333
334
338
338
338
339
339
339
342
343
344
345
13.1 Introduction
345
13.2 A General Methodology for Enzyme Reuse
348
13.2.1 The Potential of Biocatalysis by Far Exceeds
Its Current Exploitation
348
13.2.2 Unlocking the Potential of Enzymes
349
13.2.3 Immobilised Enzymes for the
Pharmaceutical Industry
350
13.2.4 The Reusable Enzyme Utopia – Enzymes
Anchored in Space
350
13.2.5 The EziG Technology
351
13.2.6 Standardised Procedure for Immobilisation 354
13.2.7 Lower Cost Materials versus High
Performance
354
13.3 Case Studies
355
13.3.1 In-reactor Enzyme Immobilisation
355
13.3.2 Two-phase System in Flow for in situ
Product Removal
356
13.3.3 Candida antarctica Lipase B (CalB)
357
13.3.4 Co-immobilisation for Cascade Reactions
358
13.4 Prospects
359
13.4.1 Stability versus Activity – Replacing Low
Cost Catalysts
359
13.4.2 Biocatalysis in Flow – Towards Manufacturing
Processes in Continuous Mode
360
13.5 Conclusions
360
Acknowledgements
361
References
361
www.pdfgrip.com
Contents
xviii
Chapter 14 Cross-linked Enzyme Aggregates (CLEAs): From
Concept to Industrial Biocatalyst
Roger A. Sheldon
14.1 Introduction: Biocatalysis is Green and
Sustainable
14.2 Immobilisation of Enzymes
14.3 The CLEA Technology
14.3.1 The Concept
14.3.2 Preparation of CLEAs
14.3.3 Physical Properties of CLEAs
14.3.4 Advantages and Limitations of CLEAs
14.3.5 Reactor Design
14.4 Scope of the CLEA Technology
14.4.1 Hydrolase CLEAs
14.4.2 Oxidoreductase and Lyase CLEAs
14.5 Multi- and Combi-CLEAs
14.6 Magnetic CLEAs: The New Frontier
14.7 Applications of CLEAs, Combi-CLEAs and
mCLEAs
14.7.1 1G and 2G Biofuels Production
14.7.2 Food and Beverages Processing
14.7.3 Synthesis of Semi-synthetic Penicillin
and Cephalosporin Antibiotics
14.7.4 Removal of Dyes, Pharma Residues and
Endocrine Disruptors from Waste
Water
14.7.5 Other Potential Applications
14.8 Conclusions and Future Prospects
References
363
363
364
365
365
366
369
370
371
373
373
376
378
381
384
385
387
388
389
389
390
390
Chapter 15 SynBiocat: Protein Purification, Immobilization and
Continuous-flow Processes
397
Diána Weiser, Zoltán Boros, József Nagy, Gábor Hornyánszky,
Evelin Bell, Péter Sátorhelyi and László Poppe
15.1 Introduction
15.2 SynBiocat – From Protein Purification to
Continuous-flow Processes
15.2.1 Enzyme Production and
Purification
15.2.2 Enzyme Immobilization
15.2.3 Desktop Bioreactor Applications
15.3 Conclusion
List of Abbreviations
Acknowledgements
References
www.pdfgrip.com
397
398
400
405
418
423
424
425
425
Contents
xix
Part IV: Emerging Industrial Biocatalysis
Chapter 16 Microvi: MicroNiche Engineering™ for Biocatalysis
in the Water and Chemical Industries
Ameen Razavi and Fatemeh Shirazi
16.1 Introduction to Microvi
16.2 Microvi’s MicroNiche Engineering™ Platform
16.3 Case Study: MicroNiche Biocatalysts for Water
Purification
16.4 Producing Case Study: MicroNiche Biocatalysts
for Biobased Chemicals
16.5 Conclusions
References
Chapter 17 Nofima: Peptide Recovery and Commercialization by
Enzymatic Hydrolysis of Marine Biomass
Birthe Vang, Themis Altintzoglou, Ingrid Måge, Sileshi G.
Wubshet, Nils K. Afseth and Ragnhild D. Whitaker
17.1 Nofima: The Company
17.2 Hydrolysis of Marine Biomass
17.2.1 Chemical Hydrolysis of Marine Biomass
17.2.2 Enzymatic Hydrolysis of Marine Biomass
17.3 Enzymes Used for Bioconversion
17.4 Quality and Classification of Marine Biomass
17.5 Functional Properties and Bioactivities of
Hydrolyzed Marine Biomass
17.6 Commercialization of Products from Marine
Biomass
17.7 Conclusions
17.8 Case Examples
17.8.1 Marealis – Producing a Nutraceutical from
Shrimp Peels
17.8.2 Polybait AS – Producing Fishing Bait
from Fisheries By-products
References
Chapter 18 CO2 Solutions: A Biomimetic Approach to Mitigate CO2
Emissions – The Use of Carbonic Anhydrase in an
“Industrial Lung”
Eric Madore and Sylvie Fradette
18.1 Introduction
18.2 Conventional Post-combustion CO2 Capture
Technologies
www.pdfgrip.com
433
433
436
443
449
454
455
459
459
461
461
462
464
465
466
471
472
472
472
473
473
477
477
478
Contents
xx
18.3 CSI’ Technology: An Industrial Lung
18.4 Selection and Development of a Robust CA
18.4.1 Elevated Ionic Strength
18.4.2 High pH
18.4.3 Temperatures Above 60 °C
18.4.4 Effect of High Surface Volume Ratio
18.4.5 Effect of High Shear Stress
18.4.6 Effect of Contaminants
18.4.7 Effect of Solid–Liquid Interface
18.4.8 Carbonic Anhydrase Development
18.5 Technology Validation/Demonstration at Pilot Scale
18.6 Conclusions
Acknowledgements
References
Subject Index
www.pdfgrip.com
481
484
485
486
486
486
487
487
488
488
491
494
494
495
497
Part I
Context and Challenges for Industrial
Biocatalysis
www.pdfgrip.com
www.pdfgrip.com
Chapter 1
An Appreciation of Biocatalysis
in the Swiss Manufacturing
Environment
Rebecca Buller*a, Katrin Hechta, Marco Antonio
Miratab and Hans-Peter Meyerc
a
Zurich University of Applied Sciences, School of Life Sciences and Facility
Management, Institute of Chemistry and Biotechnology, Einsiedlerstrasse
31, 8820 Wädenswil, Switzerland; bLonza AG, 3930 Visp, Switzerland;
c
HES-SO Valais-Wallis, Institute of Life Technologies, Route du Rawyl 64,
1950 Sion, Switzerland
*E-mail:
1.1 Introduction
Relative to its size and population, Switzerland is the global number one
in the field of large and small molecule pharmaceuticals. Despite (or perhaps due to) being a small country without a colonial history or noteworthy
natural resources with the exception of water, a remarkable landscape, and
the brains of its inhabitants, Switzerland is one of the biotechnology hotspots
in Europe. Once the rural poorhouse, Switzerland became one of the first
countries to be industrialized. Chocolate, watches and banks are the typical
enumerations of someone asked about the economic activities of Switzerland.
The pharmaceutical and chemical industries are usually not mentioned,
although they have become a major economic driver and source of wealth.
Catalysis Series No. 29
Biocatalysis: An Industrial Perspective
Edited by Gonzalo de Gonzalo and Pablo Domínguez de María
© The Royal Society of Chemistry 2018
Published by the Royal Society of Chemistry, www.rsc.org
3
www.pdfgrip.com
Chapter 1
4
As in England, the seed for industrialization was the textile industry,
which led to two other key industries in Switzerland: the machine industry
and the chemical industry. The machine industry was effectively triggered
by the continental blockade by Napoleon I in the early 19th century, which
forced the local ironmongers to develop and construct their own looms,
as they were cut off from English machines and spare parts. Indirectly the
food industry, as represented by Nestlé, also profited, as industrialization
favored food products that responded to the shorter time the working class
had available for household chores. As elsewhere, the dyes required for the
textile industry brought about the industrialization of organic chemistry. The
subsequent expansion of the production of dyes to organic chemicals, small
molecule pharmaceuticals and ultimately biopharmaceuticals was straightforward due to strategic foresight, visionary entrepreneurs, the openness of
Switzerland to foreign capital, and entrepreneurial immigrants. The banks
founded at that time also played a key role in capitalizing this industrialization. Unlike in other countries,1 these developments were not hampered by
absolutist rulers who clung to the political and societal status quo up to the
second half of the 19th century.
Today, the Swiss chemical industry has moved up the value chain from
the production of basic chemicals to the manufacture of fine chemicals.
For example, although Lonza still successfully operates a cracker in Switzerland, which was built in the 1960s, competition has increased substantially
as classic oil-producing countries have started to install on-site chemical
production complexes to keep the first part of the value chain in their own
country. Consequently, the chemical and pharmaceutical industries have
continuously refocused on core competencies and high-value products,
resulting in an entirely new landscape, structures and companies between
1970 and today.2 The Swiss chemical industry is heavily dependent on foreign trade as only ∼5% of the sales are in the home market while 95% of
the industry's products are exported. Furthermore, most raw materials
for chemical and pharmaceutical production in Switzerland have to be
imported, over 80% of them from the EU. The chemical and pharmaceutical
industry is now the country’s leading exporter,3 generating 4% of its gross
domestic product and selling products to other countries valued at around
CHF 79 billion annually (roughly 40% of total Swiss exports). About 90%
of roughly 3000 products manufactured by the Swiss chemical industry are
chemical specialties.4 The industry employs ∼65 000 people in Switzerland
and over 355 000 globally.
Switzerland has been ranked the most innovative country for the sixth
consecutive year by the Global Innovation Index.5 Roche and Novartis rank
among the top ten companies with the largest R&D investments, alongside
other industrial giants such as Microsoft, Samsung, Toyota and Amazon.6
The Swiss chemical industry is focused on life science and chemical specialties, and the world-wide sales of the top ten Swiss companies is split as
follows: pharmaceuticals 63%, fine and specialty chemicals 13%, crop protection 9%, diagnostics 8% and vitamins, flavors and fragrances 7%. Since
www.pdfgrip.com